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SigSeeker+

Peak Calling

The following peak calling tools are currently integrated into the SigSeeker+ framework.

NameCitation
MACS2in preparation
E-RangeMortazavi2008
MACSZhang2008,Feng2012
cisGenomeJi2008
Sole-SearchBlahnik2009
SICERZang2009
CCAT-HistoneXu2010
CCAT-TFXu2010
hiddendomainsStarmer2016
SWEMBLSchmidt2010

To perform ensemble-based peak calling start here.


Copyright Jens Lichtenberg
Source Code and Documentation can be found here